Publications

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Petzold L, Cao Y, Li S, Serban R.  2003.  ADJOINT SENSITIVITY ANALYSIS FOR DIFFERENTIAL-ALGEBRAIC EQUATIONS: THE ADJOINT DAE SYSTEM AND ITS NUMERICAL SOLUTION. SIAM JOURNAL ON SCIENTIFIC COMPUTING. 24:1076-1089.
Petzold LR, Cao Y, Li H, Gillespie DT.  2008.  Algorithms and software for stochastic simulation of biochemical reacting systems. BIOTECHNOLOGY PROGRESS. 24:56-61.
Petzold LR, Homescu C, Serban R.  2007.  The effect of problem perturbations on nonlinear dynamical systems and their reduced-order models. SIAM JOURNAL ON SCIENTIFIC COMPUTING. 29:2621-2643.
Petzold LR, Simeon B, Serban R.  2009.  A MODEL OF MACROSCALE DEFORMATION AND MICROVIBRATION IN SKELETAL MUSCLE TISSUE. ESAIM-MATHEMATICAL MODELLING AND NUMERICAL ANALYSIS-MODELISATION MATHEMATIQUE ET ANALYSE NUMERIQUE. 43:805-823.
Petzold LR, Hellander A, Gillespie DT.  2013.  Perspective: Stochastic algorithms for chemical kinetics. JOURNAL OF CHEMICAL PHYSICS. 138
Petzold L, Raha S, Yen J.  1998.  A time integration algorithm for flexible mechanism dynamics: The DAE alpha-method. COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING. 158:341-355.
Petzold LR, Cao Y, Gillespie DT.  2006.  Efficient step size selection for the tau-leaping simulation method. JOURNAL OF CHEMICAL PHYSICS. 124
Petzold L, Drawert B, Hellander A, Lawson MJ.  2014.  Local error estimates for adaptive simulation of the reaction-diffusion master equation via operator splitting. JOURNAL OF COMPUTATIONAL PHYSICS. 266:89-100.
Petzold L, Hellander S, Hellander A.  2012.  Reaction-diffusion master equation in the microscopic limit. PHYSICAL REVIEW E. 85
Petzold L, Hellander A, Lawson MJ.  2015.  Accuracy of the Michaelis-Menten approximation when analysing effects of molecular noise. Journal of the Royal Society Interface. 12
Petzold L, Meinhart CD, Mezic I, Zhang YT, Chen H, MacDonald NC.  2004.  SOI processing of a ring electrokinetic chaotic micromixer. :292-295.
Petzold L, Gunawan R, Doyle FJ, Cao Y.  2005.  Sensitivity analysis of discrete stochastic systems. BIOPHYSICAL JOURNAL. 88:2530-2540.
Petzold L, Robinson ASkaja, Doyle, III FJ, Raden D, Hildebrandt S.  2008.  A top-down approach to mechanistic biological modeling: Application to the single-chain antibody folding pathway. BIOPHYSICAL JOURNAL. 95:3535-3558.
Petzold L, Doyle, III F, Webb ABrooke, Herzog E, Taylor S.  2011.  The origins and consequences of heterogeneous neurons in a molecular oscillator model of the mammalian circadian clock. 25
Petzold L, Drawert B, Khammash M, Lawson MJ.  2010.  The diffusive finite state projection algorithm for efficient simulation of the stochastic reaction-diffusion master equation. JOURNAL OF CHEMICAL PHYSICS. 132
Petzold L, Drawert B, Khammash M, Yi T-M, Lawson MJ.  2013.  Spatial Stochastic Dynamics Enable Robust Cell Polarization. PLOS COMPUTATIONAL BIOLOGY. 9
Petzold L, Li H, Moehlis J, Kolpas A.  2009.  Parallel simulation for a fish schooling model on a general-purpose graphics processing unit. CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE. 21:725-737.
Peters JR, Surana A, Bullo F, Wang SJ.  2017.  Cloud-Supported Coverage Control for Persistent Surveillance Missions. JOURNAL OF DYNAMIC SYSTEMS MEASUREMENT AND CONTROL-TRANSACTIONS OF THE ASME. 139
Peters J.R, Bullo F., Borra D., Paden B.E.  2015.  SENSOR NETWORK LOCALIZATION ON THE GROUP OF THREE-DIMENSIONAL DISPLACEMENTS. SIAM JOURNAL ON CONTROL AND OPTIMIZATION. 53:3534-3561.
Pesika NS, Das S, Turner KL, Israelachvili JN, Yu J, Chary S, Tamelier J.  2011.  Gecko-Inspired Dry Adhesive for Robotic Applications. ADVANCED FUNCTIONAL MATERIALS. 21:3010-3018.
Pesika N, Tian Y, Chen Y, Turner KL, Israelachvili JN, Zhao B, Zeng H, Tirrell M.  2009.  Frictional Adhesion of Patterned Surfaces and Implications for Gecko and Biomimetic Systems. LANGMUIR. 25:7486-7495.
Perfekt K-M, Putinar M.  2017.  The Essential Spectrum of the Neumann-Poincare Operator on a Domain with Corners. ARCHIVE FOR RATIONAL MECHANICS AND ANALYSIS. 223:1019-1033.
Perfekt K-M, Putinar M.  2014.  Spectral bounds for the Neumann-Poincar, operator on planar domains with corners. JOURNAL D ANALYSE MATHEMATIQUE. 124:39-57.
Peppas NA, Podual K, Doyle F.  2004.  Modeling of water transport in and release from glucose-sensitive swelling-controlled release systems based on poly(diethylaminoethyl methacrylate-g-ethylene glycol). INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH. 43:7500-7512.
Pennathur S., Napoli M.T, Sherman S., Bamieh B., McIntosh C., Turner K..  2016.  Olive oil density characterization through microfluidic detection using acoustic signatures (MIDAS). ANALYTICAL METHODS. 8:7673-7677.

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