Publications
An algorithm for simulation of electrochemical systems with surface-bulk coupling strategies. JOURNAL OF COMPUTATIONAL PHYSICS. 229:379-398.
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2010. What Drives Consumer Choices? Mining Aspects and Opinions on Large Scale Review Data using Distributed Representation of Words International Conference on Data Mining Workshops. :908-915.
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2016. Runge-Kutta-Chebyshev projection method. JOURNAL OF COMPUTATIONAL PHYSICS. 219:976-991.
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2006. An algorithm for simulation of electrochemical systems with surface-bulk coupling strategies. :296-302.
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2009. Probabilistic User-Level Opinion Detection on Online Social Networks. Lecture Notes in Computer Science. 8851:309-325.
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2014. Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems. JOURNAL OF COMPUTATIONAL PHYSICS. 206:395-411.
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2005. Accuracy limitations and the measurement of errors in the stochastic simulation of chemically reacting systems. JOURNAL OF COMPUTATIONAL PHYSICS. 212:6-24.
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2006. A subspace error estimate or linear systems. SIAM JOURNAL ON MATRIX ANALYSIS AND APPLICATIONS. 24:787-801.
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2003. The Role of Dimerisation and Nuclear Transport in the Hes1 Gene Regulatory Network. BULLETIN OF MATHEMATICAL BIOLOGY. 76:766-798.
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2014. A posteriori error estimation and global error control for ordinary differential equations by the adjoint method. SIAM JOURNAL ON SCIENTIFIC COMPUTING. 26:359-374.
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2004. Reaction rates for a generalized reaction-diffusion master equation. PHYSICAL REVIEW E. 93
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2016. Adjoint sensitivity analysis for differential-algebraic equations: algorithms and software. JOURNAL OF COMPUTATIONAL AND APPLIED MATHEMATICS. 149:171-191.
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2002. EFFICIENT PARALLELIZATION OF THE STOCHASTIC SIMULATION ALGORITHM FOR CHEMICALLY REACTING SYSTEMS ON THE GRAPHICS PROCESSING UNIT. INTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS. 24:107-116.
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2010. Software and algorithms for sensitivity analysis of large-scale differential algebraic systems. JOURNAL OF COMPUTATIONAL AND APPLIED MATHEMATICS. 125:131-145.
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2000. Survival Topic Models for Predicting Outcomes for Trauma Patients. IEEE International Conference on Data Engineering. :1497-1504.
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2017. Reaction rates for reaction-diffusion kinetics on unstructured meshes. JOURNAL OF CHEMICAL PHYSICS. 146
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2017. Detecting Opinions in a Temporally Evolving Conversation on Twitter. Lecture Notes in Computer Science. 9471:82-97.
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2015. An error estimate for matrix equations. APPLIED NUMERICAL MATHEMATICS. 50:395-407.
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2004. A framework for discrete stochastic simulation on 3D moving boundary domains. JOURNAL OF CHEMICAL PHYSICS. 145
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2016. Efficient formulation of the stochastic simulation algorithm for chemically reacting systems. JOURNAL OF CHEMICAL PHYSICS. 121:4059-4067.
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2004. Accelerated stochastic simulation of the stiff enzyme-substrate reaction. JOURNAL OF CHEMICAL PHYSICS. 123
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2005. A stabilized explicit Lagrange multiplier based domain decomposition method for parabolic problems. JOURNAL OF COMPUTATIONAL PHYSICS. 227:5272-5285.
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2008. Automatic identification of model reductions for discrete stochastic simulation. JOURNAL OF CHEMICAL PHYSICS. 137
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2012. Multivariate soft repulsive system identification for constructing rule-based classification systems: Application to trauma clinical data. NEUROCOMPUTING. 245:77-85.
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2017. Slow-scale tau-leaping method. COMPUTER METHODS IN APPLIED MECHANICS AND ENGINEERING. 197:3472-3479.
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